P:MRI Raw

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Inheritance graph

Defined in file : brainvisa/toolboxes/primatologist/types/primatologist.py

Used in the following processes

Align and Resample
Atlas Registration: Application
Basic Mixture Fitting
Bayesian Segmentation
Brain Parcellation (EM)
Prepare MRI
Preprocessing and Atlas Registration
Primatologist
VIP Bias Correction
{Importer} MRI
{Viewer} Bias Corrected MRI
{Viewer} Mixture

Associated formats

Aperio svs
BMP image
BrainVISA volume formats
DICOM image
Directory
ECAT i image
ECAT v image
FDF image
FreesurferMGH
FreesurferMGZ
GIF image
GIS image
gz compressed MINC image
gz compressed NIFTI-1 image
Hamamatsu ndpi
Hamamatsu vms
Hamamatsu vmu
JPEG image
Leica scn
MINC image
NIFTI-1 image
PBM image
PGM image
PNG image
PPM image
Sakura svslide
SPM image
TIFF image
TIFF(.tif) image
Ventana bif
VIDA image
XBM image
XPM image
Zeiss czi

Associated ontology rules

  • brainvisa-3.2.0 :
    • {center}/{subject}/anatomical_mri/{acquisition}/<subject>

    Key attributes

  • brainvisa-3.2.0 :
    • time_point ,  time_duration ,  rescan ,  mapped ,  acquisition_date ,  contrast ,  center ,  subject ,  acquisition